23S ribosomal RNA

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Pseudoknot of the domain G(G12) of 23S ribosomal RNA
220px
Predicted secondary structure and sequence conservation of PK-G12rRNA
Identifiers
Symbol PK-G12rRNA
Rfam RF01118
Other data
RNA type Gene; rRNA
Domain(s) Bacteria
SO 0001263
File:PDB 1c2w EBI.png
A 3D representation of the ribosome. This is a view of the 3D arrangement of the 23S and 5S rRNA in the Escherichia coli 50S ribosomal subunit based on a cryo-electron microscopic reconstruction.[1]
File:PDB 2j28 EBI.jpg
A 3D representation of the ribosome.[2]

The 23S rRNA is a 2904 nt long (in E. coli) component of the large subunit (50S) of the bacterial ribosome. The ribosomal peptidyl transferase activity resides in domain V of this rRNA, and this domain is the most common binding site for antibiotics that inhibit translation. A well-known member of this antibiotic class, chloramphenicol, acts by inhibiting peptide bond formation, with recent 3D-structural studies showing two different binding sites depending on the species of ribosome. Linezolid and quinupristin-dalfopristin also bind to the 23S rRNA, and cross-resistance has been demonstrated between these antibiotics.[citation needed]

See also

References

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External links


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